eNERVE is a dynamic, high-throughput and standalone in silico reverse vaccinology pipeline for eukaryotic protein candidate vaccines (PVCs) discovery from entire proteomes (FASTA file).
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Updated
Oct 10, 2023 - Jupyter Notebook
eNERVE is a dynamic, high-throughput and standalone in silico reverse vaccinology pipeline for eukaryotic protein candidate vaccines (PVCs) discovery from entire proteomes (FASTA file).
SARS-CoV-2 Peptide Vaccine, Gen 10
SARS-CoV-2 Peptide Vaccine, Gen 12
Code, text, figures, etc. for reproducing my dissertation proposal, "Impact of Host and Vaccine Characteristics on Immune Responses following Influenza Vaccination".
SARS-CoV-2 Peptide Vaccine, Gen 11
A structurally informed immunogenicity pipeline for therapeutic TCR-epitope discovery in HPV/EBV. Integrates MHC presentation with TCR-contact physicochemical features using XGBoost, RF, and GNN/ANN benchmark models.
Protein similarity searches ranked by identity.
Representative sequence selection for large bioinformatics datasets
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