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Pull requests: aqlaboratory/openfold-3

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Pull requests list

MemorySnapshot: rename step param, register after PredictTimer
#259 opened Jun 12, 2026 by GMNGeoffrey Contributor Loading…
Fix degeneracy in attention kernel backward tests
#258 opened Jun 12, 2026 by GMNGeoffrey Contributor Loading…
Kernels revamp
#253 opened Jun 11, 2026 by sdvillal Contributor Draft
Profiling tools
#251 opened Jun 9, 2026 by christinaflo Collaborator Loading…
Reduce peak memory usage
#248 opened Jun 8, 2026 by GMNGeoffrey Contributor Draft
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Reduce get_token_frame_atoms memory usage
#244 opened Jun 2, 2026 by GMNGeoffrey Contributor Loading…
Chunk large LayerNorm inputs to work around torch bug
#231 opened May 26, 2026 by GMNGeoffrey Contributor Loading…
Make config chunk_size maximum rather than minimum safe-to-test Internal only label used to indicate PRs that are ready for automated CI testing.
#227 opened May 20, 2026 by GMNGeoffrey Contributor Loading…
Avoid flattening and expanding broadcast dimensions when chunking
#213 opened May 5, 2026 by GMNGeoffrey Contributor Loading…
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Replace scipy's truncnorm.rvs with nn.init.trunc_normal_ to make model load faster safe-to-test Internal only label used to indicate PRs that are ready for automated CI testing.
#178 opened Apr 13, 2026 by rizsp Contributor Loading…
use torch.gather() to make batched_gather() more efficient enhancement New feature or request model Related to the model definition sketch This is an idea/sketch rather than a mergeable PR, significant work needed to advance needed training Relating to the training pipeline
#135 opened Mar 14, 2026 by asdfefbhjy Draft
Preserve Raw ColabFold MSA Output Files
#35 opened Nov 12, 2025 by qurat-ul-ain95 Contributor Loading…
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