Jordi Paps lab
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- The School of Biological Sciences, University of Essex, UK
- https://www.essex.ac.uk/bs/staff/profile.aspx?ID=4561
- jpapsm@essex.ac.uk
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Phylogenetic_Aware_Parsing_Script
Phylogenetic_Aware_Parsing_Script Public‘Phylogenetic Aware Parsing Script’ (PAPS for short) is the last of a pipeline of three Perl scripts which allows the user to produce lists of homologous genes (proteins clustered using MCL) based …
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‘Phylogenetic Aware Parsing Script’ (PAPS for short) is the last of a pipeline of three Perl scripts which allows the user to produce lists of homologous genes (proteins clustered using MCL) based on their taxonomic occupancy; this allows the user to infer the patterns of gene gains and losses across a phylogeny which can be customized by the user.
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