Taxonomic classcification of Lactobacillaceae from 16S gene amplicon sequencing data
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Updated
Oct 5, 2025 - Python
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lactobacillaceae
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Predict environmental habitat preferences of Lactobacillaceae based on 16S seqs
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Updated
Jan 16, 2026 - Python
A reproducible, shotgun metagenomics pipeline (MEGAHIT, MetaBAT 2, Sourmash, Kraken 2) characterizing the microbial ecology, taxonomic abundance, and genomic bins of cocoa fermentation.
metagenomics microbiome microbial-ecology qiime2 saccharomyces-cerevisiae metabolic-profiling moshpit lactobacillaceae lactic-acid-bacteria microbial-succession food-microbiology fermentation-ecology theobroma-cacao cocoa-fermentation acetic-acid-bacteria acetobacteraceae mag-recovery
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Jun 4, 2026 - Python
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