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Achievement: StarstruckAchievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx2

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  1. CryptoBench CryptoBench Public

    Scripts for the creation of CryptoBench, a new dataset of cryptic binding sites

    Jupyter Notebook 22 1

  2. seq2pocket seq2pocket Public

    Seq2Pocket is a framework for transforming residue-level protein language model predictions into 3D binding pockets via embedding-supported smoothing and surface-based clustering.

    Jupyter Notebook 5 3

  3. esm2-generator esm2-generator Public

    How to generate ESM2 embeddings on CPU/GPU or by utilizing a SLURM-equipped cluster.

    Python 1 1

  4. broadinstitute/EmmaEmb broadinstitute/EmmaEmb Public

    Python 24 4

  5. siret-junior/ranking-server siret-junior/ranking-server Public

    A server for ranking the dataset by a text query.

    Python 4

  6. siret-junior/som-collector siret-junior/som-collector Public

    A tool for interaction log collection in limited SOMHunter evnironment.

    C++ 2