Skip to content

@AFM-SPM Software for AFM & SPM data analysis

Change the repository type filter

All

    Repositories list

    26 repositories

    • TopoStats

      Public
      An AFM image analysis program to batch process data and obtain statistics from images
      pythonafmimage-processing
      pythonafmimage-processingpython3spmhacktoberfestatomic-force-microscopy
      Python
      •
      GNU Lesser General Public License v3.0
      •21•76•142•7•Updated Jun 11, 2026Jun 11, 2026

    • PerovStats

      Public
      An image analysis program to process AFM scans of perovskite and perform analysis on them
      Python
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Jun 10, 2026Jun 10, 2026

    • topostats-training

      Public
      TopoStats Training Material
      afmimage-processingenglish
      afmimage-processingenglishlessonpre-alpha
      Other
      •0•0•8•1•Updated Jun 9, 2026Jun 9, 2026

    • AFMSlicer

      Public
      A Python package for slicing Atomic Force Microscopy images.
      Python
      •
      GNU General Public License v3.0
      •0•0•7•2•Updated Jun 8, 2026Jun 8, 2026

    • AFMReader

      Public
      A library for loading various atomic force microscopy file formats.
      afmioatomic-force-microscopy
      afmioatomic-force-microscopy
      Python
      •
      GNU General Public License v3.0
      •3•23•19•2•Updated Jun 7, 2026Jun 7, 2026

    • napari-TopoStats

      Public
      A napari plugin implementation of topostats
      Python
      •
      GNU General Public License v3.0
      •0•4•30•3•Updated Jun 7, 2026Jun 7, 2026

    • napari-AFMReader

      Public
      A Napari plugin to read in AFM files via AFMReader.
      Python
      •
      GNU General Public License v3.0
      •1•2•0•3•Updated Jun 7, 2026Jun 7, 2026

    • napari-afmslicer

      Public
      Napari plugin for using AFMSlicer
      Python
      •
      GNU General Public License v3.0
      •0•0•2•2•Updated Jun 1, 2026Jun 1, 2026

    • pySPM

      Public
      Python library to handle Scanning Probe Microscopy Images. Can read nanoscan .xml data, Bruker AFM images, Nanonis SXM files as well as iontof images(ITA, ITM a…
      Python
      •
      Apache License 2.0
      •41•1•0•0•Updated Jun 1, 2026Jun 1, 2026

    • afm-software-list

      Public
      Management of our curated AFM software list
      Python
      •
      MIT License
      •2•4•1•0•Updated Nov 4, 2025Nov 4, 2025

    • numpyencoder

      Public
      Custom Python JSON encoder for handling Numpy data types
      Python
      •
      MIT License
      •4•0•0•0•Updated Jun 3, 2025Jun 3, 2025

    • topofileformats

      Public
      Legacy package for topofileformats (now renamed to AFMReader)
      GNU General Public License v3.0
      •0•0•0•0•Updated May 29, 2024May 29, 2024

    • jupyterlite-topostats

      Public
      Run TopoStats Notebooks directly in your browser.
      jupyternotebookafm
      jupyternotebookafmjupyter-notebookimagingjupyterlite
      Jupyter Notebook
      •0•1•1•0•Updated Nov 1, 2023Nov 1, 2023

    • topo-libasd

      Public
      A fork of @toruniina 's repo for C++11/Python3 library to read/write High Speed AFM data file. This is just to get wheels working.
      C++
      •
      MIT License
      •8•0•0•0•Updated Sep 17, 2023Sep 17, 2023

    • TriplatinNC

      Public
      A repository for the code for processing the TriplatinNC AFM data.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 21, 2023Apr 21, 2023

    • pyDAMPF

      Public
      pyDAMPF: a Python package for modeling mechanical properties of hygroscopic materials under interaction with a nanoprobe
      Jupyter Notebook
      •3•1•0•0•Updated Jul 27, 2022Jul 27, 2022

    • gwyddion-python

      Public
      A dockerised Gwyddion with functioning Python support based on Linux.
      Dockerfile
      •
      MIT License
      •0•4•0•0•Updated Mar 17, 2022Mar 17, 2022

    • curves

      Public
      A toy repository to test out measuring curvature
      Python
      •
      MIT License
      •0•3•0•1•Updated Feb 15, 2022Feb 15, 2022

    • pyspm-gwyddion

      Public
      Notes on using pySPM functions in tyopostats, in place of those from Gwyddion
      Python
      •0•1•0•0•Updated Jan 17, 2022Jan 17, 2022

    • spym

      Public
      A python package for processing Scanning Probe Microscopy (SPM) data.
      Python
      •
      MIT License
      •8•2•0•0•Updated Dec 20, 2021Dec 20, 2021

    • hyperspy-eg

      Public
      HyperSpy showing an AFM image in a Jupyter notebook on myBinder / colab.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Aug 4, 2021Aug 4, 2021

    • PyJibe

      Public
      GUI for AFM data analysis with an emphasis on biological specimens
      Python
      •
      GNU General Public License v3.0
      •10•0•0•0•Updated Aug 3, 2021Aug 3, 2021

    • afmformats

      Public
      Python library for reading common AFM file formats
      Python
      •
      MIT License
      •10•0•0•0•Updated Aug 2, 2021Aug 2, 2021

    • image-analysis

      Public
      MATLAB
      •1•1•0•0•Updated Jun 17, 2021Jun 17, 2021

    • home

      Public
      A place for information and discussions.
      0•2•1•0•Updated Dec 16, 2020Dec 16, 2020

    • AFM_Youngs_modulus_fit

      Public
      matlab coding for AFM raw data post-processing > Hertz model to obtain cell Young's modulus
      MATLAB
      •2•0•0•0•Updated Apr 4, 2019Apr 4, 2019
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.