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doc: Add BIDS support for OME-Zarr#514

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kabilar:ome-bids
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doc: Add BIDS support for OME-Zarr#514
kabilar wants to merge 1 commit into
ome:mainfrom
kabilar:ome-bids

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@kabilar

@kabilar kabilar commented May 15, 2026

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Its looking like BIDS will support OME-Zarr in the near future, so I am drafting this pull request in anticipation of this support.

cc @satra @ayendiki @yarikoptic @effigies

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@lubianat

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Thank you @kabilar, would you mind taking a look also if/where BIDS would fit in https://ngff.openmicroscopy.org/resources/tools/index.html?

We will take a look at the rest ASAP to make sure we get it consistently on the website.

Let us know of the BIDS support in the future — exciting!

@lubianat

lubianat commented Jun 8, 2026

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Hi, @kabilar, we are doing a re-do of the tools/data resources documentation at #529

I am thinking of ways to showcasing BIDS there, probably in the same category as Spatial Data (https://github.com/scverse/spatialdata)

Would you have thoughts there? Maybe we can start a new documentation for OME-Zarr extensions/integrations to include frameworks that use OME-Zarr and domain-specific metadata and/or other sidecar files.

And we can add the BIDS acronym to the glossary too

lubianat added a commit to lubianat/ngff that referenced this pull request Jun 9, 2026
Also adds mentions of BIDS (ome#514), Zowser, HuggingFace Hub, the thumbnails convention, RO-Crate and BioCroissant.
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