JMLR MLOSS revision: capabilities docs, uv migration, paper sync#5
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…rkflows for improved linting and documentation
…estructuring parameters and assertions
…ducibility; add LaTeX configurations and new benchmark results
…arity and relevance
uv pip install ran before uv sync created the .venv, causing 'No virtual environment found'. Reorder so sync runs first, install the CPU torch build into that venv, and use 'uv run --no-sync' so an implicit re-sync doesn't revert it.
…scape docstrings On Python 3.12, invalid escape sequences are SyntaxWarning (DeprecationWarning on <=3.11); pytest filterwarnings=error promoted hdbscan 0.8.41's bad docstrings to a SyntaxError at import, breaking collection on both 3.12 jobs. Ignoring SyntaxWarning matches the existing Deprecation/User ignores; ruff still flags invalid escapes in our own code.
… or block release SonarCloud is advisory; the rejected SONAR_TOKEN (HTTP 403) was failing the ubuntu-3.12 job, and since release.yml reuses test.yml via workflow_call it would also block the PyPI publish. continue-on-error lets the scan still run/upload when the token works, without gating tests or releases.
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Documents FAISS/PBC/retrieval-mode APIs, completes uv migration, clean docs build (0 warnings), unit tests pass.