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Releases: jnalanko/sbwt-rs-cli

v0.3.7

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@jnalanko jnalanko released this 13 Dec 09:44
  • Parallelise the subroutine push_labels_forward. This speeds up the k-mer dump, LCS array construction and DBG construction.
  • Add a CLI command build-lcs to build the LCS array from the SBWT on the command line.
  • Make CLI commands lookup, matching-statistics, dump-kmers and dump-unitigs all print to stdout if an output file is not given.

v0.3.6

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@jnalanko jnalanko released this 11 Dec 11:03

Fixed a corner case when importing an index with an empty precalc table from the C++ format. This caused a crash at query time, which is fixed in this patch.

v0.3.5

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@jnalanko jnalanko released this 10 Dec 17:44

Add load_from_cpp_plain_matrix_format to load the index from the C++ API or CLI format: https://github.com/algbio/SBWT.