update

Author: Thomas-Rauter

index.md

@@ -7,7 +7,7 @@ title: Home
 
 ![Thomas Rauter](photo_Rauter.jpg){: style="width:150px; height:auto; border-radius:50%;" }
 
-Last updated: 28.06.2025
+Last updated: 15.12.2025
 
 Hello, I’m **Thomas Rauter**, currently a PhD researcher in **Bioinformatics** at the 
 Paris-Lodron-University of Salzburg, Austria. This website is my 

scientific-publications.md

@@ -4,7 +4,8 @@ title: Scientific Publications
 ---
 # Scientific Publications
 
-A list of scientific publications where I am one of the authors:
+A list of scientific publications where I am one of the authors (also listed 
+on Google Scholar: https://scholar.google.com/citations?user=A0DJVxcAAAAJ&hl=de):
 
 
 ---
@@ -19,4 +20,12 @@ A list of scientific publications where I am one of the authors:
 [Read the paper](https://doi.org/10.1186/s12934-023-02280-2)
 
 **Abstract**  
-Existing plasmid systems offer a fundamental foundation for gene expression in *Cupriavidus necator*; however, their applicability is constrained by the limitations of conjugation. Low segregational stabilities and plasmid copy numbers, particularly in the absence of selection pressure, pose challenges. Phytases, recognized for their widespread application as supplements in animal feed to enhance phosphate availability, present an intriguing prospect for heterologous production in *C. necator*. The establishment of stable, high-copy number plasmids that can be electroporated would support the utilization of *C. necator* for the production of single-cell protein from CO2.
+Existing plasmid systems offer a fundamental foundation for gene expression
+in *Cupriavidus necator*; however, their applicability is constrained by the
+limitations of conjugation. Low segregational stabilities and plasmid copy
+numbers, particularly in the absence of selection pressure, pose challenges.
+Phytases, recognized for their widespread application as supplements in animal
+feed to enhance phosphate availability, present an intriguing prospect for
+heterologous production in *C. necator*. The establishment of stable, high-copy
+number plasmids that can be electroporated would support the utilization of
+*C. necator* for the production of single-cell protein from CO2.

software-packages.md

@@ -21,17 +21,3 @@ I have developed the following software packages:
 **Overview**  
 An R package for finding significant features (hits) in time-series -omics data using splines and limma for hypothesis testing. It clusters hits based on spline shape and generates summary HTML reports.
 
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-<br>
-
-## **sqlite_manager**
-
-![Python](https://img.shields.io/badge/Python-yellow?style=flat&logo=python&logoColor=white) 
-![SQLite](https://img.shields.io/badge/SQLite-lightblue?style=flat&logo=sqlite&logoColor=white)
-
-[GitHub Repository](https://github.com/Thomas-Rauter/sqlite_manager)
-
-**Overview**  
-A small Python package for personal use in my SQL data analysis projects. Designed to streamline 
-SQLite database creation from dataframes and query execution workflows.