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Request: Path to most processed BAM file

Status: Open.

#26 In MPI-EVA-Archaeogenetics/helper_scripts;

· hringbauer opened on Mar 29, 2026

Picard Duplicate Fraction is wrongly named "Percentage"

Status: Open.

#23 In MPI-EVA-Archaeogenetics/helper_scripts;

· stschiff opened on Oct 8, 2025

Check TSV and MQC are consistent with one another

Status: Open.

#22 In MPI-EVA-Archaeogenetics/helper_scripts;

· TCLamnidis opened on Sep 19, 2025

snps_covered and snps_total sometimes become N/A in high coverage samples.

Status: Open.

#21 In MPI-EVA-Archaeogenetics/helper_scripts;

· TCLamnidis opened on Sep 8, 2025

Add exception for libraries without data

Status: Open.

#15 In MPI-EVA-Archaeogenetics/helper_scripts;

· TCLamnidis opened on Oct 9, 2024

Add SG data info to capture outputs

Status: Open.

#13 In MPI-EVA-Archaeogenetics/helper_scripts;

· TCLamnidis opened on Oct 8, 2024

samples_eager_status empty when run completed

Status: Open.

#8 In MPI-EVA-Archaeogenetics/helper_scripts;

· TCLamnidis opened on Sep 20, 2023

samples_eager_status should ensure that the latest data has been included in the run too.

Status: Open.

#5 In MPI-EVA-Archaeogenetics/helper_scripts;

· TCLamnidis opened on May 25, 2023