Skip to content

Use awk directly in CWL step#136

Merged
lonbar merged 3 commits into
masterfrom
tweak_concat_csv
Jun 26, 2026
Merged

Use awk directly in CWL step#136
lonbar merged 3 commits into
masterfrom
tweak_concat_csv

Conversation

@lonbar

@lonbar lonbar commented Jun 25, 2026

Copy link
Copy Markdown
Member

No description provided.

lonbar added 3 commits June 25, 2026 12:15
concat_csv.cwl does not use javascript expressions. It does use
parameter references, but do not require a Javascript engine[1].

[1] https://www.commonwl.org/v1.0/CommandLineTool.html#Parameter_references
@lonbar lonbar requested a review from jurjen93 June 25, 2026 21:56
@lonbar lonbar marked this pull request as ready for review June 25, 2026 21:57
@jurjen93

Copy link
Copy Markdown
Member

Tested it and confirmed this refactor gives the same output.

@lonbar lonbar merged commit 6ee3e50 into master Jun 26, 2026
6 checks passed
@lonbar lonbar deleted the tweak_concat_csv branch June 26, 2026 13:28
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants