metaMDBG-1.4

• Major performance update (runtime and memory)
• Better polishing around contig ends
• Added contig filter options --min-contig-length and --min-contig-coverage
• Added shortcut parameter names (-o for outputDir and -t for threads)

metaMDBG-1.3.1

• Fixed bug in HiFi mode

metaMDBG-1.3

Big update on assembly quality:

• Fixed clipping events
• Fixed zero-coverage regions
• Fixed chimeric contigs
• Improved performances

metaMDBG-1.2

• Improved assembly quality (clipping events, dereplication, polishing, etc)
• Improved performances
• Added checkpoint system

metaMDBG-1.1

• Improved minimizer-space read correction
• Better detection of erroneous contigs
• Added option --skip-correction
• Bug fixes

metaMDBG-1.0

metaMDBG now handle Nanopore r10.4+ reads

• Added minimizer-space correction step
• MetaMDBG parameters changed (options now use explicit names)
• Contig information format changed in final assemblty fasta file (see Readme - "Contig information")
• Removed rescued circular step
• Removed dependencies to samtools and wfmash
• Fixed missing "time" dependencies in conda recipe
• Fixed bug in gfa command

metaMDBG-0.3

First release of metaMDBG