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@EBIvariation

EBI Variation

Projects managed and developed by the EVA at the EMBL-EBI

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  1. vcf-validator vcf-validator Public

    Validation suite for Variant Call Format (VCF) files, implemented using C++11

    C++ 140 43

  2. eva-pipeline eva-pipeline Public

    Genomic variation pipeline for the European Variation Archive, implemented using Spring Batch

    Java 5 24

  3. eva-ws eva-ws Public

    European Variation Archive REST web services API

    Java 6 21

  4. eva-web eva-web Public

    Web front-end for the European Variation Archive

    JavaScript 5 10

  5. eva-tools eva-tools Public

    Tools compatible with the infrastructure of the European Variation Archive pipeline

    Java 1 13

  6. variation-commons variation-commons Public

    Library of core components used by multiple EBI Variation projects

    Java 2 17

Repositories

Showing 10 of 55 repositories
  • opentargets-pharmgkb Public

    Pipeline to provide evidence strings for Open Targets from PharmGKB

    EBIvariation/opentargets-pharmgkb's past year of commit activity
    Jupyter Notebook 1 Apache-2.0 4 10 0 Updated Oct 13, 2026
  • eva-k8s Public

    kubernetes deployment file for all of EVA webservices

    EBIvariation/eva-k8s's past year of commit activity
    Python 0 Apache-2.0 3 0 1 Updated Oct 12, 2026
  • eva-submission-ws Public

    Web services for EVA Submissions

    EBIvariation/eva-submission-ws's past year of commit activity
    Java 0 Apache-2.0 4 0 1 Updated Oct 12, 2026
  • eva-integration-tests Public

    Integration tests for validating interactions across EVA repositories and services.

    EBIvariation/eva-integration-tests's past year of commit activity
    Python 0 Apache-2.0 3 0 0 Updated Oct 9, 2026
  • eva-sub-cli Public

    EVA Submission Command Line Interface for Validation

    EBIvariation/eva-sub-cli's past year of commit activity
    HTML 1 Apache-2.0 7 0 1 Updated Oct 8, 2026
  • eva-accession Public

    EVA non-human variant accessioning service

    EBIvariation/eva-accession's past year of commit activity
    Java 4 Apache-2.0 12 0 2 Updated Oct 8, 2026
  • eva-ws Public

    European Variation Archive REST web services API

    EBIvariation/eva-ws's past year of commit activity
    Java 6 Apache-2.0 21 0 3 Updated Oct 8, 2026
  • eva-seqcol Public

    Java implementation of the sequence collection specification to represent INSDC assemblies

    EBIvariation/eva-seqcol's past year of commit activity
    Java 1 Apache-2.0 6 10 0 Updated Oct 8, 2026
  • contig-alias Public

    Service to provide synonyms of chromosome/contig identifiers

    EBIvariation/contig-alias's past year of commit activity
    Java 4 Apache-2.0 11 10 0 Updated Oct 8, 2026
  • vcf-dumper Public
    EBIvariation/vcf-dumper's past year of commit activity
    Java 0 Apache-2.0 1 0 0 Updated Oct 8, 2026

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