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Files for running the beast on XSEDE#20

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lea-hagen:metal_xsede_files
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Files for running the beast on XSEDE#20
lea-hagen wants to merge 2 commits into
BEAST-Fitting:masterfrom
lea-hagen:metal_xsede_files

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@lea-hagen

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This has all the scripts I've used for running the METAL fields through the BEAST on XSEDE. I need to finish the script to copy over the beast output files, and then I'll add it here too.

Question: where would be a good place to put documentation on how to run it all? There's a section in the workflow page that describes sbatch files that I could expand on (though that's already a lot of things on that page), or make a separate page for XSEDE info.
https://beast.readthedocs.io/en/latest/workflow.html#using-slurm

@karllark

karllark commented Jan 4, 2021

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I feel a separate page about XSEDE and slurm would be ideal. So, please create a separate page and move the slurm material there. If you add a link to the end of the workflow page, then we can find this material and add more (like how to do this on other systems and queue methods).

@lea-hagen

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That's exactly what I ended up doing! Adding the PR link here:
BEAST-Fitting/beast#688

@karllark

karllark commented Jan 4, 2021

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Awesome!

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