result_tuned = Tune_ConQuR(
tax_tab=Sample_Data_real,
batchid=batchid,
covariates=covar,
batch_ref_pool=c("0", "1", "2", "3"),
logistic_lasso_pool=c(T, F),
quantile_type_pool=c("standard", "lasso", "composite"),
simple_match_pool=c(T, F),
lambda_quantile_pool=c(NA, "2p/n", "2p/logn"),
interplt_pool=c(T, F),
frequencyL=0,
frequencyU=1,
cutoff = 0.1,
delta = 0.4999,
taus = seq(0.005, 0.995, by = 0.005),
num_core = 10
)
After running for a couple of hours, the following error was printed to the terminal:
Error in FUN(newX[, i], ...) : invalid 'type' (character) of argument
In addition: There were 50 or more warnings (use warnings() to see the first 50)
I can provide a copy of the dataset for debugging when you are next available to work on this.
I recently ran Tune_ConQuR() on a smaller dataset as follows:
After running for a couple of hours, the following error was printed to the terminal:
I can provide a copy of the dataset for debugging when you are next available to work on this.