gvcf
Here are 8 public repositories matching this topic...
biotec-line organization profile for local-first bioinformatics, VCF, genotype conversion, and research-use-only genetic variant tools
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Jun 4, 2026
SWEEP - Joint variant calling workflow based on GATK best practices.
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Mar 31, 2022 - Shell
Local-first VCF/gVCF genetic variant annotation desktop app for research use only (Windows, 23andMe, FASTA, gnomAD)
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Jun 7, 2026 - Python
1,674 S.cerevisiae genomics data
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Nov 16, 2024 - Shell
Nextflow pipeline for joint-calling cohort gVCFs on Slurm HPC. GenomicsDBImport -> GenotypeGVCFs -> bcftools concat. Resumable, designed for ~1,500-sample human WGS.
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Jun 8, 2026 - Nextflow
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