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evolution_NTK.py
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178 lines (126 loc) · 6.58 KB
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"""
Computes and compares experimental and theoretical values for the Neural Tangent Kernel (NTK).
Tracks their evolution over training steps.
I am trying to replicate Figure 10 of arXiv: 1909.11304
IN PROGRESS
**Usage:**
```bash
python evolution_NTK.py
"""
import numpy as np
import torch
import torch as nn
import torch.nn.functional as F
import matplotlib.pyplot as plt
import time
from tqdm import tqdm
import os
import sys
from utils.helper_computation import *
from utils.helper_theory import *
from utils.helper_parse_ct_data import parse_ct_data
######################### Hyperparameters #########################
device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
use_identity_activation = False
Cw = 2
num_data_points = 2
width_hidden_layer = 128
num_layers = 2
scale_learning_rate_tensor = True
num_networks_ensemble = 10
num_train_steps = 1000
epsilon = 1e-1
delay_train_steps = 20
###################################################################
script_dir = os.path.dirname(__file__)
path_to_ct_data = 'utils/slice_localization_data.csv'
file_path = os.path.join(script_dir, path_to_ct_data)
# Obtain data
X_train, X_val, X_test, y_train, y_val, y_test = parse_ct_data(file_path)
num_inputs = X_train.shape[1]
# Scale learning rate tensor appropriately
lambda_w_inputs = 1 / num_inputs if scale_learning_rate_tensor else 1
lambda_w_hidden_layer = 1 / width_hidden_layer if scale_learning_rate_tensor else 1
lambda_b = 1
# Convert to Torch tensors
X_train = torch.from_numpy(X_train).float().to(device)
X_val = torch.from_numpy(X_val).float().to(device)
X_test = torch.from_numpy(X_test).float().to(device)
y_train = torch.from_numpy(y_train).float().to(device)
y_val = torch.from_numpy(y_val).float().to(device)
y_test = torch.from_numpy(y_test).float().to(device)
# Slighlty reduce X_train size
X_train = X_train[:1000]
y_train = y_train[:1000]
X_reduced = X_train[:num_data_points]
selected_element_NTK = (1,0)
# Let's now track evolution of NTK. We wil track the evolution of the selected element
time_evol_NTK = np.zeros((num_networks_ensemble, num_train_steps // delay_train_steps))
# We don't calculate H after every training step, but after every delay_train_steps training steps
list_train_steps = np.arange(1, num_train_steps // delay_train_steps + 1) * delay_train_steps
print("Starting experiments...")
for m in tqdm(range(num_networks_ensemble)):
model = initiate_model(num_inputs, width_hidden_layer, num_layers, Cw, use_identity_activation, device)
lambda_w, num_params = get_lambda_matrix_diagonal(lambda_w_inputs, lambda_w_hidden_layer, lambda_b, num_inputs, width_hidden_layer, num_layers)
# We now train model
H0 = obtain_H(model, X_reduced, lambda_w, num_data_points, num_params)
for j in range(num_train_steps):
train_model_one_step(model, X_train, y_train, epsilon, lambda_w_inputs, lambda_w_hidden_layer, lambda_b)
if j % delay_train_steps == 0:
H = obtain_H(model, X_reduced, lambda_w, num_data_points, num_params)
time_evol_NTK[m, j//delay_train_steps] = H[selected_element_NTK] - H0[selected_element_NTK]
average_time_evol_NTK = np.mean(time_evol_NTK, axis=0)
std_time_evol_NTK = np.std(time_evol_NTK, axis=0) / np.sqrt(num_networks_ensemble)
print(H0[selected_element_NTK])
print(H[selected_element_NTK])
plt.errorbar(list_train_steps, average_time_evol_NTK, yerr=std_time_evol_NTK, fmt='.')
plt.show()
sys.exit()
####################################### GRAPHS ##########################################
list_colours = ['r', 'g', 'b', 'k']
average_array_mse_H_constant_lambdaw = np.mean(list_array_mse_H_constant_lambdaw, axis=0)
std_array_mse_H_constant_lambdaw = np.sqrt(np.var(list_array_mse_H_constant_lambdaw, axis=0)/repeat_exp)
average_array_mse_H_variable_lambdaw = np.mean(list_array_mse_H_variable_lambdaw, axis=0)
std_array_mse_H_variable_lambdaw = np.sqrt(np.var(list_array_mse_H_variable_lambdaw, axis=0)/repeat_exp)
fig, axs = plt.subplots(1, 2, figsize=(18, 7))
fig.suptitle("MSE Error H Matrices")
for i, width_hidden_layer in enumerate(list_width):
axs[0].errorbar(list_train_steps, average_array_mse_H_constant_lambdaw[i], yerr=std_array_mse_H_constant_lambdaw[i], linestyle='none', marker='.', color=list_colours[i], label=f"Width: {width_hidden_layer}")
axs[1].errorbar(list_train_steps, average_array_mse_H_variable_lambdaw[i], yerr=std_array_mse_H_variable_lambdaw[i], linestyle='none', marker='x', color=list_colours[i], label=f"Width: {width_hidden_layer}")
axs[0].set_title("Constant $\lambda_w$")
axs[0].set_xlabel("Training Steps")
axs[0].set_ylabel("MSE Error H Matrices")
axs[0].set_yscale('log')
axs[0].legend()
axs[1].set_title("Variable $\lambda_w$")
axs[1].set_xlabel("Training Steps")
axs[1].set_ylabel("MSE Error H Matrices")
axs[1].set_yscale('log')
axs[1].legend()
fig.tight_layout()
fig.savefig(f'Data/sidebyside_{repeat_exp}_trials.png', dpi=100, bbox_inches='tight')
plt.show()
fig = plt.figure(figsize=(10, 7))
fig.tight_layout()
for i, width_hidden_layer in enumerate(list_width):
plt.errorbar(list_train_steps, average_array_mse_H_constant_lambdaw[i], yerr=std_array_mse_H_constant_lambdaw[i], linestyle='none', marker='.', color=list_colours[i])
plt.errorbar(list_train_steps, average_array_mse_H_variable_lambdaw[i], yerr=std_array_mse_H_variable_lambdaw[i], linestyle='none', marker='x', color=list_colours[i])
plt.xlabel("Training Steps")
plt.ylabel("MSE Error H Matrices")
plt.yscale('log')
# Create custom legends
import matplotlib.lines as mlines
color_lines = [mlines.Line2D([], [], color=c, marker='.', linestyle='None') for c in list_colours]
regime_lines = [mlines.Line2D([], [], color='black', marker=m, linestyle='None') for m in ['.', 'x']]
# Add legends
list_width_labels = ["Width: " + str(w) for w in list_width]
legend1 = plt.legend(color_lines, list_width_labels, bbox_to_anchor=(1, 0.32), fontsize=12)
plt.gca().add_artist(legend1)
legend2 = plt.legend(regime_lines, ['Constant $\lambda_w$', 'Variable $\lambda_w$'], loc='lower right', fontsize=12)
plt.title("Evolution of MSE Error of H Matrices")
plt.savefig(f'Data/together_{repeat_exp}_trials.png', dpi=100, bbox_inches='tight')
plt.show()
# Save average_array_mse_H_constant_lambdaw to a CSV file
np.savetxt(f'Data/average_array_mse_H_constant_lambdaw_{repeat_exp}_trials.csv', average_array_mse_H_constant_lambdaw, delimiter=',')
# Save average_array_mse_H_variable_lambdaw to a CSV file
np.savetxt(f'Data/average_array_mse_H_variable_lambdaw_{repeat_exp}_trials.csv', average_array_mse_H_variable_lambdaw, delimiter=',')