harmonizer/.env.example at main · microbiomedata/harmonizer · GitHub

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# Harmonizer Environment Configuration
# Copy this file to .env and fill in your values.
#
# This single .env serves two consumers:
#   * docker compose — substitutes ${VAR} in docker-compose.yml (Postgres creds,
#     ports, DOCKER_GID, the host project dir, ...).
#   * the app — pydantic-settings reads HARMONIZER_*-prefixed vars (plus the
#     vendor-standard ANTHROPIC_API_KEY) at startup.
# Loading priority: env vars > .env > defaults


#############################################
# SERVER
#############################################
# PORT=8080                                       # Published web server port (compose)


#############################################
# PROVIDER SELECTION & MODEL OVERRIDES
#############################################
# HARMONIZER_PROVIDER=anthropic                   # Agent backend the factory dispatches on
# HARMONIZER_MODEL=                               # Model id; unset defers to the CLI/provider default


#############################################
# PROVIDER CREDENTIALS
#############################################
# Direct Anthropic API — get your key from https://console.anthropic.com
ANTHROPIC_API_KEY=sk-ant-api03-your-key-here


#############################################
# DATABASE
#############################################
# Docker: docker-compose.yml builds HARMONIZER_DATABASE_URL from these + the
# `postgres` service hostname, so normally you only edit the values here.
POSTGRES_USER=harmonizer
POSTGRES_PASSWORD=harmonizer_dev_password
POSTGRES_DB=harmonizer
POSTGRES_PORT=5432                                # Host port; change to avoid conflicts with other Postgres instances

# App (local dev, no Docker): set the sync-driver URL directly. psycopg (v3) is
# the sync driver matching the app's engine. Unset, the app falls back to a
# local SQLite file (fine for single-process dev, NOT for container isolation).
# HARMONIZER_DATABASE_URL=postgresql+psycopg://harmonizer:harmonizer_dev_password@localhost:5432/harmonizer


#############################################
# JOBS & ORCHESTRATION
#############################################
# HARMONIZER_JOBS_ROOT=jobs                       # Root dir for per-job directories (compose sets /app/jobs)
# HARMONIZER_MAX_ITERATIONS=10                    # Default orchestrator iteration budget


#############################################
# CONTAINER ISOLATION (per-job sibling containers)
#############################################
# HARMONIZER_USE_CONTAINER_ISOLATION=1            # 1 = run each job in a sibling container; 0 = in-process loop
# HARMONIZER_JOB_IMAGE=harmonizer-agent:latest    # Image the per-job container runs
# HARMONIZER_CONTAINER_APP_DIR=/app               # App path inside the container (WORKDIR)
# HARMONIZER_AGENT_NETWORK=                        # Explicit Docker network; unset auto-detects the compose network

# Host path of THIS project dir on the Docker host. Sibling containers are
# launched on the host daemon, so their bind-mount sources must be host paths;
# the runner translates ${HARMONIZER_CONTAINER_APP_DIR}/... → this. Compose
# defaults it to ${PWD}; set explicitly if compose runs from another directory.
# HARMONIZER_HOST_PROJECT_DIR=

# GID of the host's docker group, so the web container can talk to the mounted
# socket. Find it with:  stat -c '%g' /var/run/docker.sock   (Linux)
#                        stat -f '%g' /var/run/docker.sock   (macOS)
# DOCKER_GID=999

# HARMONIZER_RESTART_POLICY=unless-stopped        # compose restart policy for postgres/web