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12 lines (12 loc) · 1 KB
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# Each line denotes path to a file that are prerequisite to build the MBC-MSM
# Careful about the weights paths
n_clust = 1200 # number of clusters
lag_time = 100 # lag time
clusterlabels_pkl_path = /dickson/s1/bosesami/time_lagged_data_WE/sEH_test/lig50/data/model_1200/cluster_iter/debug/reshaped_cluster_labels_50_nclust1200.pkl #
h5_path = /dickson/s1/bosesami/sEH_combined/50/REVO/clone_all.h5 #
merge_fixed_wts_path = /dickson/s1/kilincce/projects/p3_lagtime/sEH/data/50/fixed_wt_cycle_based_dictionary #without run and .pkl extension
we_wts_path = /dickson/s1/kilincce/projects/p3_lagtime/sEH/data/50/wt_cycle_based_dictionary #without run and .pkl extension
M_path = /dickson/s1/bosesami/time_lagged_data_WE/sEH_test/lig50/data/model_1200/cluster_iter/debug/M_stored_w2_counts_lig50_lag100.pkl #
out_path = /dickson/s1/bosesami/time_lagged_data_WE/sEH_test/lig50/data/model_1200/cluster_iter/debug/output/ #
MBC_file = C_MBC_w2_counts_lag100_nclust1200.pkl #
Obs_file = C_obs_w2_counts_lag100_nclust1200.pkl #