Update to v2.0.0 of IG (#45)

* Update to v2.0.0 of IG

* Proper version number

* Make IG URLs version-specific

Author: ljtucker

Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    uds_plus_test_kit (1.2.0)
+    uds_plus_test_kit (1.2.1)
       inferno_core (~> 0.6.2)
 
 GEM

README.md

@@ -2,7 +2,7 @@
 - [Inferno documentation](https://inferno-framework.github.io/inferno-core/)
 - [Ruby API documentation](https://inferno-framework.github.io/inferno-core/docs)
 - [JSON API documentation](https://inferno-framework.github.io/inferno-core/api-docs)
-- [UDS+ Implementation Guide](https://fhir.org/guides/hrsa/uds-plus/)
+- [UDS+ Implementation Guide](https://fhir.org/guides/hrsa/uds-plus/STU2)
 
 ## Connectathon Links
 - [Connectathon Manager](http://conman.clinfhir.com/connectathon.html?event=con33)
@@ -11,8 +11,8 @@
 - [UDS+ Connectathon Page](https://confluence.hl7.org/pages/viewpage.action?pageId=161056877)
 
 ## Version
-**Test Kit:** 1.2.0
-**IG:** 1.1.2
+**Test Kit:** 1.2.1
+**IG:** 2.0.0
 
 ### Notes From the Developers
 - There are known issues with validating certain codesets (not resource structure) when running this kit locally. If you are running locally and encounter an "Unknown Code" error for a given resource, try running that same resource on the hosted version of the kit and see if the codeset can be validated there.

lib/uds_plus_test_kit/examples/adverse_event.ndjson

@@ -1 +1 @@
-{"resourceType":"AdverseEvent","id":"de-identified-example","meta":{"lastUpdated":"2017-05-26T11:56:57.250-04:00","profile":["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-adverseevent"]},"actuality":"actual","category":[{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/adverse-event-category","code":"medication-mishap","display":"Medication Mishap"}],"text":"Medication Mishap - Wrong Dose"}],"event":{"coding":[{"system":"http://snomed.info/sct","code":"140004","display":"Chronic Pharyngitis"}],"text":"Chronic Pharyngitis"},"subject":{"reference":"Patient/de-identified-example"},"date":"2015","recordedDate":"2017"}
+{ "resourceType" : "AdverseEvent", "id" : "de-identified-example", "meta" : { "lastUpdated" : "2017-05-26T11:56:57.250-04:00", "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-adverseevent"] }, "actuality" : "actual", "category" : [{ "coding" : [{ "system" : "http://terminology.hl7.org/CodeSystem/adverse-event-category", "code" : "medication-mishap", "display" : "Medication Mishap" }], "text" : "Medication Mishap - Wrong Dose" }], "event" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "140004", "display" : "Chronic Pharyngitis" }], "text" : "Chronic Pharyngitis" }, "subject" : { "reference" : "Patient/de-identified-example" }, "date" : "2015", "detected" : "2030", "recordedDate" : "2017" }

lib/uds_plus_test_kit/examples/allergy_intollerance.ndjson

@@ -1 +1 @@
-{"resourceType":"AllergyIntolerance","id":"de-identified-example","meta":{"lastUpdated":"2017-05-26T11:56:57.250-04:00","profile":["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-allergyintolerance"]},"clinicalStatus":{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical","code":"active"}]},"verificationStatus":{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/allergyintolerance-verification","code":"confirmed"}]},"category":["medication"],"criticality":"high","code":{"coding":[{"system":"http://snomed.info/sct","code":"387406002","display":"Sulfonamide (substance)"}],"text":"sulfonamide antibacterial"},"patient":{"reference":"Patient/de-identified-example"},"onsetDateTime":"2015","recordedDate":"2017","reaction":[{"manifestation":[{"coding":[{"system":"http://snomed.info/sct","code":"271807003","display":"skin rash"}],"text":"skin rash"}],"severity":"mild"}]}
+{  "resourceType" : "AllergyIntolerance",  "id" : "de-identified-example",  "meta" : {    "lastUpdated" : "2017-05-26T11:56:57.250-04:00",    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-allergyintolerance"]  },  "clinicalStatus" : {    "coding" : [{      "system" : "http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical",      "code" : "active"    }]  },  "verificationStatus" : {    "coding" : [{      "system" : "http://terminology.hl7.org/CodeSystem/allergyintolerance-verification",      "code" : "confirmed"    }]  },  "category" : ["medication"],  "criticality" : "high",  "code" : {    "coding" : [{      "system" : "http://snomed.info/sct",      "code" : "387406002",      "display" : "Sulfonamide (substance)"    }],    "text" : "sulfonamide antibacterial"  },  "patient" : {    "reference" : "Patient/de-identified-example"  },  "onsetDateTime" : "2015",  "recordedDate" : "2017",  "reaction" : [{    "manifestation" : [{      "coding" : [{        "system" : "http://snomed.info/sct",        "code" : "271807003",        "display" : "skin rash"      }],      "text" : "skin rash"    }],    "severity" : "mild"  }]}

lib/uds_plus_test_kit/examples/condition.ndjson

@@ -1 +1 @@
-{"resourceType":"Condition","id":"de-identified-example","meta":{"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/instance-name","valueString":"De-identified Diagnosis Example"},{"url":"http://hl7.org/fhir/StructureDefinition/instance-description","valueMarkdown":"This example of a UDS+ Diagnosis profile which illustrates its use to capture de-identified information about a patient's diagnosis."}],"profile":["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-diagnosis"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/condition-assertedDate","valueDateTime":"2007"}],"clinicalStatus":{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/condition-clinical","code":"active","display":"Active"}]},"verificationStatus":{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/condition-ver-status","code":"confirmed","display":"Confirmed"}]},"category":[{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/condition-category","code":"problem-list-item","display":"Problem List Item"}]}],"code":{"coding":[{"system":"http://hl7.org/fhir/sid/icd-10-cm","code":"B18.2","display":"Chronic viral hepatitis C"}]},"subject":{"reference":"Patient/de-identified-example"},"onsetDateTime":"2007","recordedDate":"2007"}
+{  "resourceType" : "Condition",  "id" : "de-identified-example",  "meta" : {    "extension" : [{      "url" : "http://hl7.org/fhir/StructureDefinition/instance-name",      "valueString" : "De-identified Diagnosis Example"    },    {      "url" : "http://hl7.org/fhir/StructureDefinition/instance-description",      "valueMarkdown" : "This example of a UDS+ Diagnosis profile which illustrates its use to capture de-identified information about a patient's diagnosis."    }],    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-diagnosis"]  },  "extension" : [{    "url" : "http://hl7.org/fhir/StructureDefinition/condition-assertedDate",    "valueDateTime" : "2007"  }],  "clinicalStatus" : {    "coding" : [{      "system" : "http://terminology.hl7.org/CodeSystem/condition-clinical",      "code" : "active",      "display" : "Active"    }]  },  "verificationStatus" : {    "coding" : [{      "system" : "http://terminology.hl7.org/CodeSystem/condition-ver-status",      "code" : "confirmed",      "display" : "Confirmed"    }]  },  "category" : [{    "coding" : [{      "system" : "http://terminology.hl7.org/CodeSystem/condition-category",      "code" : "problem-list-item",      "display" : "Problem List Item"    }]  }],  "code" : {    "coding" : [{      "system" : "http://hl7.org/fhir/sid/icd-10-cm",      "code" : "B18.2",      "display" : "Chronic viral hepatitis C"    }]  },  "subject" : {    "reference" : "Patient/de-identified-example"  },  "onsetDateTime" : "2007",  "recordedDate" : "2007"}

lib/uds_plus_test_kit/examples/coverage.ndjson

@@ -1 +1 @@
-{    "resourceType": "Coverage",    "id": "de-identified-example",    "meta": {        "profile": [            "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-coverage"        ]    },    "extension": [        {            "url": "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-capitated-member-months-extension",            "valueQuantity": {                "value": 36,                "unit": "yr",                "system": "http://unitsofmeasure.org",                "code": "a"            }        },        {            "url": "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-feeforservice-member-months-extension",            "valueQuantity": {                "value": 36,                "unit": "yr",                "system": "http://unitsofmeasure.org",                "code": "a"            }        }    ],    "status": "active",    "type": {        "coding": [            {                "system": "http://fhir.org/guides/hrsa/uds-plus/CodeSystem/uds-plus-insurance-codes",                "code": "private-insurance",                "display": "Private Insurance"            }        ]    },    "beneficiary": {        "reference": "Patient/de-identified-example"    },    "period": {        "start": "2019",        "end": "2023"    },    "payor": [        {            "reference": "Organization/acme-payer"        }    ]}
+{  "resourceType" : "Coverage",  "id" : "de-identified-example",  "meta" : {    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-coverage"]  },  "extension" : [{    "url" : "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-capitated-member-months-extension",    "valueQuantity" : {      "value" : 36,      "unit" : "yr",      "system" : "http://unitsofmeasure.org",      "code" : "a"    }  },  {    "url" : "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-feeforservice-member-months-extension",    "valueQuantity" : {      "value" : 36,      "unit" : "yr",      "system" : "http://unitsofmeasure.org",      "code" : "a"    }  }],  "status" : "active",  "type" : {    "coding" : [{      "system" : "http://fhir.org/guides/hrsa/uds-plus/CodeSystem/uds-plus-insurance-codes",      "code" : "private-insurance",      "display" : "Private Insurance"    }]  },  "beneficiary" : {    "reference" : "Patient/de-identified-example"  },  "period" : {    "start" : "2019",    "end" : "2023"  },  "payor" : [{    "reference" : "Organization/acme-payer"  }]}

lib/uds_plus_test_kit/examples/data_urls.ndjson

@@ -1 +1 @@
-{    "resourceType": "Parameters",    "id": "de-identify-data-operation-urls-example",    "meta": {        "profile": [            "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-deidentify-operation-data-urls-parameter"        ]    },    "parameter": [        {            "name": "format",            "valueCode": "fhir+ndjson"        },        {            "name": "udsData",            "part": [                {                    "name": "resourceType",                    "valueCode": "Patient"                },                {                    "name": "resourceUrl",                    "valueUrl": "http://example.com/Patient.ndjson"                }            ]        }    ]}
+{  "resourceType" : "Parameters",  "id" : "de-identify-data-operation-urls-example",  "meta" : {    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-deidentify-operation-data-urls-parameter"]  },  "parameter" : [{    "name" : "format",    "valueCode" : "fhir+ndjson"  },  {    "name" : "udsData",    "part" : [{      "name" : "resourceType",      "valueCode" : "Patient"    },    {      "name" : "resourceUrl",      "valueUrl" : "http://example.com/Patient.ndjson"    }]  }]}

lib/uds_plus_test_kit/examples/encounter.ndjson

@@ -1 +1 @@
-{"resourceType":"Encounter","id":"de-identified-example","meta":{"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/instance-name","valueString":"De-Identified Encounter Example"},{"url":"http://hl7.org/fhir/StructureDefinition/instance-description","valueMarkdown":"This is an encounter example for the *US Core Encounter Profile*."}],"lastUpdated":"2022-05-26T11:56:57.250-04:00","profile":["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-encounter"]},"extension":[{"url":"http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-age-extension","valueQuantity":{"value":36,"unit":"yr","system":"http://unitsofmeasure.org","code":"a"}}],"status":"finished","class":{"system":"http://terminology.hl7.org/CodeSystem/v3-ActCode","code":"AMB","display":"ambulatory"},"type":[{"coding":[{"system":"http://www.ama-assn.org/go/cpt","code":"99202"}]}],"subject":{"reference":"Patient/de-identified-example"},"period":{"start":"2022","end":"2022"},"hospitalization":{"dischargeDisposition":{"coding":[{"system":"http://www.nubc.org/patient-discharge","code":"01","display":"Discharged to Home"}]}},"location":[{"location":{"reference":"Location/hospital","display":"Holy Family Hospital"}}]}
+{  "resourceType" : "Encounter",  "id" : "de-identified-example",  "meta" : {    "extension" : [{      "url" : "http://hl7.org/fhir/StructureDefinition/instance-name",      "valueString" : "De-Identified Encounter Example"    },    {      "url" : "http://hl7.org/fhir/StructureDefinition/instance-description",      "valueMarkdown" : "This is an encounter example for the *US Core Encounter Profile*."    }],    "lastUpdated" : "2022-05-26T11:56:57.250-04:00",    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-encounter"]  },  "extension" : [{    "url" : "http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-age-extension",    "valueQuantity" : {      "value" : 36,      "unit" : "yr",      "system" : "http://unitsofmeasure.org",      "code" : "a"    }  }],  "status" : "finished",  "class" : {    "system" : "http://terminology.hl7.org/CodeSystem/v3-ActCode",    "code" : "AMB",    "display" : "ambulatory"  },  "type" : [{    "coding" : [{      "system" : "http://www.ama-assn.org/go/cpt",      "code" : "99202"    }]  }],  "subject" : {    "reference" : "Patient/de-identified-example"  },  "period" : {    "start" : "2022",    "end" : "2022"  },  "hospitalization" : {    "dischargeDisposition" : {      "coding" : [{        "system" : "http://www.nubc.org/patient-discharge",        "code" : "01",        "display" : "Discharged to Home"      }]    }  },  "location" : [{    "location" : {      "reference" : "Location/hospital",      "display" : "Holy Family Hospital"    }  }]}

lib/uds_plus_test_kit/examples/immunization.ndjson

@@ -1 +1 @@
-{"resourceType":"Immunization","id":"de-identified-example","meta":{"profile":["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-immunization"]},"status":"completed","statusReason":{"coding":[{"system":"http://terminology.hl7.org/CodeSystem/condition-category","code":"encounter-diagnosis","display":"Encounter Diagnosis"}]},"vaccineCode":{"coding":[{"system":"http://hl7.org/fhir/sid/cvx","code":"197","display":"influenza, high-dose, quadrivalent"}]},"patient":{"reference":"Patient/de-identified-example"},"occurrenceDateTime":"2023","recorded":"2023","primarySource":true}
+{  "resourceType" : "Immunization",  "id" : "de-identified-example",  "meta" : {    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-immunization"]  },  "status" : "completed",  "statusReason" : {    "coding" : [{      "system" : "http://terminology.hl7.org/CodeSystem/condition-category",      "code" : "encounter-diagnosis",      "display" : "Encounter Diagnosis"    }]  },  "vaccineCode" : {    "coding" : [{      "system" : "http://hl7.org/fhir/sid/cvx",      "code" : "197",      "display" : "influenza, high-dose, quadrivalent"    }]  },  "patient" : {    "reference" : "Patient/de-identified-example"  },  "occurrenceDateTime" : "2023",  "recorded" : "2023",  "primarySource" : true}

lib/uds_plus_test_kit/examples/medication_request.ndjson

@@ -1 +1 @@
-{"resourceType":"MedicationRequest","id":"de-identified-example","meta":{"profile":["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-medicationrequest"]},"status":"active","intent":"order","medicationCodeableConcept":{"coding":[{"system":"http://www.nlm.nih.gov/research/umls/rxnorm","code":"476872","display":"Nizatidine 15 MG/ML Oral Solution"}]},"subject":{"reference":"Patient/de-identified-example"},"encounter":{"reference":"Encounter/de-identified-example"},"authoredOn":"2008","requester":{"reference":"Practitioner/example"},"dosageInstruction":[{"text":"10 mL bid","timing":{"repeat":{"boundsPeriod":{"start":"2008-04-05"},"frequency":2,"period":1,"periodUnit":"d"}},"doseAndRate":[{"doseQuantity":{"value":10,"unit":"ml","system":"http://unitsofmeasure.org","code":"mL"}}]}]}
+{  "resourceType" : "MedicationRequest",  "id" : "de-identified-example",  "meta" : {    "profile" : ["http://fhir.org/guides/hrsa/uds-plus/StructureDefinition/uds-plus-medicationrequest"]  },  "status" : "active",  "intent" : "order",  "medicationCodeableConcept" : {    "coding" : [{      "system" : "http://www.nlm.nih.gov/research/umls/rxnorm",      "code" : "476872",      "display" : "Nizatidine 15 MG/ML Oral Solution"    }]  },  "subject" : {    "reference" : "Patient/de-identified-example"  },  "encounter" : {    "reference" : "Encounter/de-identified-example"  },  "authoredOn" : "2008",  "requester" : {    "reference" : "Practitioner/example"  },  "dosageInstruction" : [{    "text" : "10 mL bid",    "timing" : {      "repeat" : {        "boundsPeriod" : {          "start" : "2008-04-05"        },        "frequency" : 2,        "period" : 1,        "periodUnit" : "d"      }    },    "doseAndRate" : [{      "doseQuantity" : {        "value" : 10,        "unit" : "ml",        "system" : "http://unitsofmeasure.org",        "code" : "mL"      }    }]  }]}