smoll

Author: greydongilmore

registration/registration.py

@@ -1613,7 +1613,7 @@ def registerVolumes(self, fixedVolumeNode, movingVolumeNode, derivFolder, regAlg
 				rigidMetric = self.regAlgo['parameters']['metric']
 				rigidMetricParams = self.regAlgo['parameters']['metric_params']
 
-				rigidstage = ' '.join([
+				rigidStage = ' '.join([
 					f'--initial-moving-transform ["{fixedVolume}","{movingVolume}",1]',
 					f"--transform Rigid[{self.regAlgo['parameters']['gradientstep']}]",
 					f'--metric {rigidMetric}["{fixedVolume}","{movingVolume}",{rigidMetricParams}]',

resources/settings/trajectoryGuide_settings.json

@@ -1,5 +1,5 @@
 {
-    "default_dir": "C:\\Users\\greydongilmore\\Documents\\data\\emory\\DBS\\derivatives\\trajGuide\\bids",
+    "default_dir": "/home/greydon/Documents/data/moncton/derivatives/trajGuide/bids",
     "surgical_targets": [
         "STN",
         "GPi",