Lets create a test slide + experiment to test if the different feature versions are working properly in all places. Spots we should have:
- Sequence defined glycan (no linker or lipid)
- Unknown glycan (no linker or lipid)
- Mass defined glycan (no linker or lipid)
- Unknown glycan with linker
- Mass defined glycan with linker
- Sequence defined glycopepide (position 1: sequence defined glycan; position 2: Mass defined glycan; position 3: unknown glycan)
- Like 6. but with linker on the glycopeptide and linkers for each glycan position
- Unknown glycopeptide (3 glycans: sequence defined, mass defined, unknown)
- Like 8 but with linkers on the glycopeptide and linkers for each glycan
- Other molecule
- Sequence defined glycoprotein version of 6
- Sequence defined glycoprotein version of 7
- Unknown glycoprotein version of 8
- Unknown glycoprotein version of 9
- Sequence defined glycoprotein with 6-9 as attchement and linker on the glycoprotein
- Mixture of 4 and 5
@senaarpinar any other combination that might cause issues?
Lets create a test slide + experiment to test if the different feature versions are working properly in all places. Spots we should have:
@senaarpinar any other combination that might cause issues?