feat: add support for rsfitsio as backend #1142
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| name: tests | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: null | |
| env: | |
| PY_COLORS: "1" | |
| # These compiler flags force the tests to fail if arrays are | |
| # accessed at the C level from an unaligned location. | |
| TEST_CFLAGS: "-fsanitize=alignment -fno-sanitize-recover=alignment" | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| tests: | |
| name: tests | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [macos-latest, ubuntu-latest] | |
| config: | |
| - { pyver: "3.10", npver: "1", ft: ""} | |
| - { pyver: "3.11", npver: "1.26", ft: "python-gil"} | |
| # - { pyver: "3.12", npver: "1.26", ft: "python-gil"} | |
| # - { pyver: "3.11", npver: "2", ft: "python-gil"} | |
| # - { pyver: "3.12", npver: "2", ft: "python-gil"} | |
| # - { pyver: "3.13", npver: "2", ft: "python-gil"} | |
| - { pyver: "3.14", npver: "2", ft: "python-gil"} | |
| - { pyver: "3.14", npver: "2", ft: "python-freethreading"} | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| PIP_OPTIONS: "--no-cache-dir --no-deps --no-build-isolation -v" | |
| steps: | |
| - name: free disk space | |
| if: matrix.os == 'ubuntu-latest' | |
| uses: endersonmenezes/free-disk-space@v3 | |
| with: | |
| remove_android: true | |
| remove_dotnet: true | |
| remove_haskell: true | |
| rm_cmd: "rmz" | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: mamba-org/setup-micromamba@d7c9bd84e824b79d2af72a2d4196c7f4300d3476 #v3.0.0 | |
| with: | |
| environment-name: fitsio-dev | |
| environment-file: environment.yml | |
| condarc: | | |
| channels: | |
| - conda-forge | |
| show_channel_urls: true | |
| channel_priority: strict | |
| always_yes: true | |
| create-args: >- | |
| python=${{ matrix.config.pyver }} | |
| numpy=${{ matrix.config.npver }} | |
| ${{ matrix.config.ft }} | |
| - name: set parallel testing flags | |
| run: | | |
| if [[ "${{ matrix.config.pyver }}" == "3.14" ]]; then | |
| echo "PRP_FLAGS=--parallel-threads 4 --iterations 4" >> ${GITHUB_ENV} | |
| fi | |
| - name: test bundled build | |
| run: | | |
| export CFLAGS="${CFLAGS} ${TEST_CFLAGS}" | |
| pip cache purge | |
| rm -rf build* | |
| rm -rf $HOME/cfitsio-static-install | |
| find . -name "*.so" -type f -delete | |
| pip install ${PIP_OPTIONS} -e . | |
| if [[ "${{ matrix.os }}" == "ubuntu-latest" ]]; then | |
| pytest -vv --durations=20 ${PRP_FLAGS} fitsio | |
| python -c "import fitsio; assert not fitsio.backend_has_bzip2_support()" | |
| python -c "import fitsio; assert not fitsio.backend_has_curl_support()" | |
| else | |
| pytest -vv --durations=20 ${PRP_FLAGS} fitsio | |
| python -c "import fitsio; assert fitsio.backend_has_bzip2_support()" | |
| python -c "import fitsio; assert fitsio.backend_has_curl_support()" | |
| fi | |
| python -c "import fitsio; assert fitsio.backend_is_reentrant()" | |
| - name: install bzip2 and curl on linux | |
| if: matrix.os == 'ubuntu-latest' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libbz2-dev curl libcurl4-openssl-dev | |
| - name: test install sdist .gz with no unit tests | |
| run: | | |
| export CFLAGS="${CFLAGS} ${TEST_CFLAGS}" | |
| pip cache purge | |
| rm -rf build* | |
| rm -rf $HOME/cfitsio-static-install | |
| find . -name "*.so" -type f -delete | |
| rm -rf dist | |
| python setup.py sdist | |
| pip install ${PIP_OPTIONS} dist/*.tar.gz | |
| cd .. | |
| python -c "import fitsio; assert not fitsio.__version__.startswith('0')" | |
| cd - | |
| pip uninstall fitsio --yes | |
| - name: test sdist | |
| run: | | |
| export CFLAGS="${CFLAGS} ${TEST_CFLAGS}" | |
| pip cache purge | |
| rm -rf build* | |
| rm -rf $HOME/cfitsio-static-install | |
| find . -name "*.so" -type f -delete | |
| rm -rf dist | |
| python setup.py sdist | |
| pushd dist/ | |
| fname=$(ls fitsio*.gz) | |
| tar xvfz "$fname" | |
| dname=$(echo "$fname" | sed 's/\.tar\.gz//') | |
| pushd $dname | |
| pip install ${PIP_OPTIONS} -e . | |
| pytest -vv --durations=20 ${PRP_FLAGS} fitsio | |
| python -c "import fitsio; assert fitsio.backend_has_bzip2_support()" | |
| python -c "import fitsio; assert fitsio.backend_has_curl_support()" | |
| python -c "import fitsio; assert fitsio.backend_is_reentrant()" | |
| popd | |
| popd |