ssdtools/_pkgdown.yml at main · bcgov/ssdtools · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
url: https://bcgov.github.io/ssdtools/

template:
  bootstrap: 5

development:
  mode: auto

authors:
  Joe Thorley:
    href: https://github.com/joethorley
  Rebecca Fisher:
    href: https://www.aims.gov.au/about/our-people/dr-rebecca-fisher
  David Fox:
    href: https://training.ecotox.science/who-we-are/
  Carl Schwarz:
    href: https://www.sfu.ca/stat-actsci/department/profiles/carl-schwarz.html
  Province of British Columbia:
    href: https://www2.gov.bc.ca/
  Environment and Climate Change Canada:
    href: https://www.canada.ca/en/environment-climate-change.html
  Australian Government Department of Climate Change, Energy, the Environment and Water:
    href: https://www.dcceew.gov.au/
reference:
- title: Distribution Names
  desc: Functions that return character vectors of distribution names
  contents:
  - ssd_dists
  - ssd_dists_all
  - ssd_dists_bcanz
  - ssd_dists_shiny
- title: Fit
  desc: Functions that fit distributions to data
  contents:
  - ssd_fit_dists
  - ssd_fit_bcanz
  - ssd_fit_burrlioz
- title: Hazard Concentrations and Proportions
  desc: Functions that calculate hazard concentrations and Proportions
  contents:
  - ssd_hc
  - ssd_hc_bcanz
  - ssd_hp
  - ssd_hp_bcanz
- title: Manipulate Data
  desc: Functions that manipulate data
  contents:
  - ssd_censor_data
  - ssd_data
  - ssd_sort_data
- title: Manipulate Fits
  desc: Functions that manipulate fits of distributions
  contents:
  - augment.fitdists
  - coef.fitdists
  - estimates.fitdists
  - glance.fitdists
  - predict.fitburrlioz
  - predict.fitdists
  - ssd_gof
  - subset.fitdists
  - tidy.fitdists
- title: Plots
  desc: Functions to Generate Plots
  contents:
  - autoplot.fitdists
  - geom_hcintersect
  - geom_ssdpoint
  - geom_ssdsegment
  - geom_xribbon
  - scale_fill_ssd
  - scale_color_ssd
  - scale_colour_ssd
  - ssd_label_comma
  - ssd_label_comma_hc
  - ssd_pal
  - ssd_plot
  - ssd_plot_cdf
  - ssd_plot_data
  - ssdtools-ggproto
- title: Distributional Functions
  desc: Distribution, quantile, random functions
  contents:
  - ssd_p
  - ssd_q
  - ssd_r
  - ssd_e
- title: Miscellaneous
  desc: Miscellaneous functions and data
  contents:
  - boron_pred
  - dist_data
  - is.fitdists
  - ssd_licensing_md
  - npars
  - params
  - ssd_at_boundary
  - ssd_ci_methods
  - ssd_computable
  - ssd_ecd
  - ssd_ecd_data
  - ssd_est_methods
  - ssd_exposure
  - ssd_is_censored
  - ssd_match_moments
  - ssd_min_pmix
- title: Deprecated
  desc: Deprecated functions which will become defunct in future versions
  contents:
  - comma_signif
  - geom_ssd
  - is_censored
  - ssd_wqg_bc
  - ssd_wqg_burrlioz
  - ssd_hc_burrlioz
  - ssd_plot_cf
  - stat_ssd
  - dgompertz
  - pgompertz
  - qgompertz
  - rgompertz
  - dlgumbel
  - plgumbel
  - qlgumbel
  - rlgumbel

articles:
- title: All vignettes
  contents:
  - articles/model-averaging
  - articles/distributions
  - articles/confidence-intervals
  - articles/customising-plots
  - articles/small-sample-bias
  - articles/additional-technical-details
  - faqs