Issues

• dependency on nodejs14 failing context deployment

  bug
  aws/amazon-genomics-cli#642 · Filter by author jdavredbeard opened on Apr 11, 2024
  1

• workflow stuck in running stage

  aws/amazon-genomics-cli#641 · Filter by author bharatij opened on Mar 8, 2024

• Getting Cannot find latest version of nf-validation plugin when running NextFlow pipelines

  bug
  aws/amazon-genomics-cli#634 · Filter by author DanielWhite21 opened on Dec 20, 2023
  1

• Provided region_name ... doesn't match a supported format

  bug
  aws/amazon-genomics-cli#629 · Filter by author m3talsmith opened on Oct 27, 2023
  1

• Feature Request: Custom Tags at Context Level

  enhancement
  aws/amazon-genomics-cli#627 · Filter by author jaamarks opened on Oct 5, 2023

• Add Elastic Throughput Mode

  enhancement
  aws/amazon-genomics-cli#626 · Filter by author ElDeveloper opened on Oct 2, 2023

• User-specified dependencies in runtime environment

  enhancement
  aws/amazon-genomics-cli#615 · Filter by author bballew opened on Jun 14, 2023

• No KMS Support For Default EBS Encryption

  enhancement
  aws/amazon-genomics-cli#614 · Filter by author privorhart opened on Jun 1, 2023

• Update the version of Nextflow used to 23.04.1

  enhancement
  aws/amazon-genomics-cli#609 · Filter by author gf-atebbe opened on May 5, 2023

• Nextflow > 22.04.03 not supported!

  enhancement
  aws/amazon-genomics-cli#599 · Filter by author MoniDR opened on Mar 24, 2023
  1

• PATH overwritten on debian-based images using miniwdl

  bug
  aws/amazon-genomics-cli#598 · Filter by author hkeward opened on Mar 23, 2023

• Native AWS batch support for snakemake

  enhancement
  aws/amazon-genomics-cli#593 · Filter by author fgypas opened on Feb 14, 2023

• How to deploy context using a private GitHub repository?

  aws/amazon-genomics-cli#592 · Filter by author spitfiredd opened on Feb 10, 2023

• Quantify cost of using EFS provisioned throughput

  aws/amazon-genomics-cli#590 · Filter by author wleepang opened on Jan 13, 2023

• Exec format error on Mac M1 with V1.6.0

  buginvestigating
  aws/amazon-genomics-cli#589 · Filter by author TSFelg opened on Jan 9, 2023
  3

• nf-core/sarek demo doesn't work due to the input validation error

  bug
  aws/amazon-genomics-cli#587 · Filter by author veselovamazon opened on Jan 6, 2023

• Add support for minvcpu and desiredvCpus to context

  enhancement
  aws/amazon-genomics-cli#579 · Filter by author KevinSayers opened on Dec 14, 2022

• Workflow definitions that include a workflow.zip file fail parsing in CromwellWESAdapter

  bug
  aws/amazon-genomics-cli#577 · Filter by author wleepang opened on Dec 7, 2022
  1

• Support using custom images from public repository

  enhancement
  aws/amazon-genomics-cli#576 · Filter by author mattcarp12 opened on Dec 2, 2022

• AGC not working with enforced S3 encryption

  bug
  aws/amazon-genomics-cli#574 · Filter by author ArlindNocaj opened on Nov 23, 2022

• ecr:SetRepositoryPolicy missing for account activate with minimum permissions

  bug
  aws/amazon-genomics-cli#573 · Filter by author ArlindNocaj opened on Nov 22, 2022
  1

• Workflow running out of memory

  bug
  aws/amazon-genomics-cli#570 · Filter by author spitfiredd opened on Nov 17, 2022
  5

• agc context deploy not rebuilding workflow.zip file

  bug
  aws/amazon-genomics-cli#567 · Filter by author spitfiredd opened on Nov 15, 2022
  2

• Add warning if a local work dir is found

  enhancement
  aws/amazon-genomics-cli#552 · Filter by author KevinSayers opened on Oct 31, 2022
  2

• AGC run fails when empty strings in inputs.json file

  bug
  aws/amazon-genomics-cli#547 · Filter by author biofilos opened on Oct 27, 2022
  4