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Books - online Books - on reserve Websites

Books - online

Severance, C., Python For Everybody, 2016 (freely available online at https://www.py4e.com/book.php)

Emery, W. J. and R. E. Thomson, Data Analysis Methods in Physical Oceanography, 2nd ed., 2013, Elsevier, Amsterdam, ISBN: 978-0-444-50756-3, http://www.sciencedirect.com/science/book/9780444507563 (available for free download on MLML campus)

Green Tea Press - Free books by Allen B. Downey (Includes Think Python, which formed the basis for Python for Everybody listed above) https://greenteapress.com/wp/

Books - on reserve

https://reserves.calstate.edu/mosslanding/course/611792370002913

Statistics and data analysis methods

Glover, D. M., W. J. Jenkins, and S. C. Doney, Modeling Methods for Marine Science, 2011, Cambridge University Press, Cambridge, UK. ISBN: 9780521867832

Davis, J. C., Statistical and Data Analysis In Geology, 2002, John Wiley & Sons, Hoboken, NJ, ISBN: 978-81-265-3008-3

Milroy, S. W. Field Methods In Marine Science: From Measurements To Models, 2016, Garland Science, New York, NY ISBN: 978-0-8153-4476-6

Scientific computing with Python:

DeCaria, A. J., Python Programming and Visualization for Scientists, Sundog Publishing, Madison, WI, ISBN: 978-0-9729033-8-7

Kinder, J. M. and P. Nelson, A Student’s Guide To Python for Physical Modeling, 2015, Princeton University Press, ISBN: 978-0-691-16958-3

Haddock, S. H. D. and C. W. Dunn, Practical Computing for Biologists, 2011, Sinauer Associates, Sunderland, MA ISBN: 201003948610.

Shapiro, B. E., Scientific Computation: Python Hacking for Math Junkies, 2016, Sherwood Forest Books, Los Angeles, CA

Stevens, T. J. and Boucher, W., Python Programming for Biology: Bioinformatics and Beyond, 2015, Cambridge University Press, ISBN: 978-0-521-72009-0

Version Control (Git):

Daityari, S., Jump Start Git, 2015. SitePoint Pty. Ltd., VIC, Aus. ISBN: 9780994182654 http://discover.sjlibrary.org/iii/encore_sjsu/record/C__Rb5077409

Making beautiful figures:

Tufte, E. R., The Visual Display of Quantitative Information, 1983, Graphics Press, Cheshire, CT

Websites

Learning to code

Why learning to code is so damn hard

Signal processing and time series analysis

Understanding the FFT alogorithm (Python tutorial))

Numerical tours in Python

Jupyter Notebooks

Interactive notebooks: sharing the code (Nature)

Reproducible Data Analysis in Jupyter

Become a lord of the cells and speed up your Jupyter workflow

Jupyter notebook tips, tricks and shortcuts

Advanced Jupyter notebook tricks