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Researcher at FMVZ/USP
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Researcher at FMVZ/USP
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ThaleslSilva/README.md

Hi there, I'm Thales de Lima Silva 👋

PhD in Animal Science | Bioinformatics | Data Science | Machine Learning

LinkedIn Gmail Google Scholar Twitter Website

🧬 About Me

I'm a Bioinformatician and Data Scientist with a strong interdisciplinary background in Animal Science, Genomics, and Bioinformatics. My work bridges traditional agricultural sciences with modern computational approaches to solve complex biological questions.

  • 🎓 PhD in Genetics and Animal Breeding — FCAV/UNESP (2023)
  • 🎓 MSc in Zootechnics (Genetics & Animal Breeding) — UESB (2019)
  • 🎓 MBA in Agribusiness — ESALQ/USP (2015)
  • 🎓 BSc in Veterinary Medicine — PUC Minas (2012)

Currently I'm a Postdoctoral Researcher at FMVZ/USP, working at the frontier of pangenomics and structural variant analysis in livestock genomes.

🔬 Research Interests

  • Bioinformatics & High-Density Genomic Data Analysis
  • Quantitative Genetics & Genomic Selection
  • Pangenome graph construction (multi-assembly, ONT & PacBio HiFi long-read)
  • Structural variant calling & population-scale genotyping (NGS short + long-read)
  • Machine Learning applied to Animal Breeding
  • Business Intelligence & Data Analytics

🛠️ Tech Stack

Languages & Tools:

R Python Jupyter Power BI AWS Git Linux

Data Science:

Pandas NumPy Scikit-Learn Matplotlib

📂 Featured Projects

Project Description Stack
🧬 Genomics Tools for data analysis in genomics and animal breeding R
🐄 DataCattle Data analysis tools for the livestock production and beef cattle market Python, Jupyter
📊 DataScience General Data science projects and analyses Python, Jupyter

📊 GitHub Stats

Top Languages GitHub Stats

📫 Get in Touch

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  1. Genomics Genomics Public

    🐄 🔬 💻 Repository of tools for data analysis in genomics and animal genetic improvement.

    R 3 1

  2. DataCattle DataCattle Public

    💲 💹 🐮 Repositório de ferramentas para análise de dados do mercado de boi gordo no Brasil.

    Jupyter Notebook

  3. DataScience DataScience Public

    Data Science portfolio: Machine Learning, NLP, Social Network Analysis, and Data Visualization using Python and R.

    Jupyter Notebook

  4. COWADAPT COWADAPT Public

    Genomic investigation to identify genetic variants conferring adaptability in zebu cattle (e.g., Nellore) to tropical environments, using a multi-assembly graph approach. A collaboration between US…

    Shell