-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathpom.xml
More file actions
132 lines (128 loc) · 4.63 KB
/
Copy pathpom.xml
File metadata and controls
132 lines (128 loc) · 4.63 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
<project>
<modelVersion>4.0.0</modelVersion>
<groupId>nl.wur.plantbreeding</groupId>
<artifactId>gff2RDF</artifactId>
<packaging>jar</packaging>
<version>1.0</version>
<name>gff2RDF</name>
<url>https://github.com/PBR/gff2RDF</url>
<licenses>
<license>
<name>New BSD</name>
<url>https://fedoraproject.org/wiki/Licensing/BSD#3ClauseBSD</url>
<distribution>repo</distribution>
</license>
</licenses>
<issueManagement>
<system>github</system>
<url>https://github.com/PBR/gff2RDF/issues</url>
</issueManagement>
<scm>
<connection>scm:git:https://github.com/PBR/gff2RDF.git</connection>
<developerConnection>scm:git:git@github.com:PBR/gff2RDF.git</developerConnection>
<url>https://github.com/PBR/gff2RDF</url>
</scm>
<description>
The goal of this project is to provide an easy way to convert the genome
annotation of some crops into a semantic format.
The genome annotation is accessible via gff files (tab separated values).
These files are read and converted into RDF.
The RDF model generated by this tool is used by the marker2seq project
available for tomato at: https://www.eu-sol.wur.nl/marker2seq
</description>
<organization>
<name>Wageningen UR Plant Breeding</name>
<url>http://www.plantbreeding.wur.nl</url>
</organization>
<inceptionYear>2012</inceptionYear>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.0.2</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<configuration>
<archive>
<manifest>
<mainClass>nl.wur.plantbreeding.gff2RDF.App</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<version>1.2.1</version>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-doap-plugin</artifactId>
<version>1.1</version>
<configuration>
<doapOptions>
<created>${project.inceptionYear}-01-10</created>
<shortdesc>Provides an easy way to convert the genome
annotation of some crops into a semantic format
</shortdesc>
<vendor>${project.organization.name}</vendor>
<license>${project.licenses[0].url}</license>
</doapOptions>
</configuration>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>3.8.1</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.hp.hpl.jena</groupId>
<artifactId>jena</artifactId>
<version>2.6.4</version>
<type>jar</type>
</dependency>
<dependency>
<groupId>commons-lang</groupId>
<artifactId>commons-lang</artifactId>
<version>2.4</version>
<type>jar</type>
</dependency>
<dependency>
<groupId>args4j</groupId>
<artifactId>args4j</artifactId>
<version>2.0.12</version>
<type>jar</type>
</dependency>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>poi</artifactId>
<version>3.7</version>
<type>jar</type>
</dependency>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>poi-ooxml</artifactId>
<version>3.7</version>
<type>jar</type>
</dependency>
</dependencies>
</project>