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Update AlphaFold backend container versions in config #10

Update AlphaFold backend container versions in config

Update AlphaFold backend container versions in config #10

Workflow file for this run

name: tests
on:
push:
branches: [main]
pull_request:
workflow_dispatch:
jobs:
unit-tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.10", "3.12"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install alphapulldown-input-parser
# common.smk imports parse_fold_chains from the parser package; >=0.5.0
# is required for the public helper.
run: pip install --quiet "alphapulldown-input-parser>=0.5.0"
- name: Byte-compile common.smk
# common.smk carries the memory/length logic; delegates parsing to the parser.
run: python -m py_compile workflow/rules/common.smk
- name: Run resource/length unit tests
# The suite loads common.smk directly; the SLURM-plugin integration test
# self-skips when the plugin is absent.
run: python test/test_memory_resources.py