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52 lines (45 loc) · 1.26 KB
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[package]
name = "rapidtrees"
version = "0.7.1"
edition = "2024"
description = "Fast pairwise tree distance calculations (Robinson-Foulds, Weighted RF, Kuhner-Felsenstein) for phylogenetic trees"
license = "MIT"
repository = "https://github.com/Joon-Klaps/rapidtrees"
homepage = "https://github.com/Joon-Klaps/rapidtrees"
readme = "README.md"
keywords = ["phylogenetics", "tree-distance", "robinson-foulds", "bioinformatics"]
categories = ["science", "command-line-utilities"]
[lib]
name = "rapidtrees"
crate-type = ["rlib", "cdylib"]
[[bin]]
name = "rapidtrees"
path = "src/main.rs"
required-features = ["cli"]
[dependencies]
phylotree = "0.1.3"
pyo3 = { version = "0.27.1", optional = true }
rayon = "1"
clap = { version = "4.5", features = ["derive"], optional = true }
flate2 = { version = "1", optional = true }
rustc-hash = "2.1"
hashbrown = "0.17.1"
[features]
default = ["cli"]
cli = ["clap", "flate2"]
python = ["pyo3"]
extension-module = ["python", "pyo3/extension-module"]
[dev-dependencies]
itertools = "0.14.0"
rand = "0.10.1"
criterion = "0.8.2"
cpu-time = "1.0.0"
memory-stats = "1.0.0"
tempfile = "3"
divan = { package = "codspeed-divan-compat", version = "4" }
[[bench]]
name = "memory_time_benchmark"
harness = false
[[bench]]
name = "codspeed"
harness = false