syntax fixes

Author: andrawaag

examples/IDR/002--idr-uniprot.ttl

@@ -1,25 +1,27 @@
 @prefix dc: <http://purl.org/dc/elements/1.1/> .
- @prefix dcterms: <http://purl.org/dc/terms/> .
- @prefix ex: <https://sparql.uniprot.org/.well-known/sparql-examples/> .
- @prefix idr: <https://idr.openmicroscopy.org/> .
- @prefix kv: <http://www.openmicroscopy.org/ns/default/> .
- @prefix obda: <https://w3id.org/obda/vocabulary#> .
- @prefix omecore: <https://ld.openmicroscopy.org/core/> .
- @prefix omekg: <https://ld.openmicroscopy.org/omekg#> .
- @prefix owl: <http://www.w3.org/2002/07/owl#> .
- @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
- @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
- @prefix schema: <https://schema.org/> .
- @prefix sh: <http://www.w3.org/ns/shacl#> .
- @prefix xml: <http://www.w3.org/XML/1998/namespace/> .
- @prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
- 
+@prefix dcterms: <http://purl.org/dc/terms/> .
+@prefix ex: <https://sparql.uniprot.org/.well-known/sparql-examples/> .
+@prefix idr: <https://idr.openmicroscopy.org/> .
+@prefix kv: <http://www.openmicroscopy.org/ns/default/> .
+@prefix obda: <https://w3id.org/obda/vocabulary#> .
+@prefix omecore: <https://ld.openmicroscopy.org/core/> .
+@prefix omekg: <https://ld.openmicroscopy.org/omekg#> .
+@prefix owl: <http://www.w3.org/2002/07/owl#> .
+@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix schema: <https://schema.org/> .
+@prefix sh: <http://www.w3.org/ns/shacl#> .
+@prefix spex: <https://purl.expasy.org/sparql-examples/ontology#> .
+@prefix xml: <http://www.w3.org/XML/1998/namespace/> .
+@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
+
 
 ex:002 a sh:SPARQLExecutable, sh:SPARQLSelectExecutable ;
     rdfs:comment "Federated query connecting to Uniprot proteins via Gene Identifier key-value annotation."^^rdf:HTML ;
     sh:prefixes _:sparql_example_prefixes ;
     schema:keywords "key-value annotations, uniprot, federated query, proteins" ;
     schema:target <http://idr-sparql.uni-muenster.de/qlever/sparql> ;
+    spex:federatesWith <https://qlever.dev/api/uniprot> ;
     sh:select """
     PREFIX owl: <http://www.w3.org/2002/07/owl#>
     PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
@@ -36,19 +38,19 @@ ex:002 a sh:SPARQLExecutable, sh:SPARQLSelectExecutable ;
     PREFIX up: <http://purl.uniprot.org/core/>
     PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
     prefix bgee: <http://purl.uniprot.org/bgee/>
-    
+
     select distinct ?img ?bgee ?up_protein where {
       <https://idr.openmicroscopy.org/Project/52>
       dcterms:hasPart/dcterms:hasPart ?img .
       ?img a omecore:Image ;
            omecore:hasAnnotation/omecore:mapEntry [omecore:key ?key; omecore:value ?value] .
       filter(?key = "Gene Identifier")
       bind(iri(concat(str(bgee:),?value)) as ?bgee) .
-    
+
       SERVICE <https://qlever.dev/api/uniprot> {
         ?up_protein a up:Protein ;
                     up:reviewed true ;
                     rdfs:seeAlso ?bgee .
         }
     }
-    """
+""" .

examples/IDR/007-image-keys-usage.ttl

@@ -14,7 +14,7 @@
 @prefix xml: <http://www.w3.org/XML/1998/namespace/> .
 @prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
 
-ex:003 a sh:SPARQLExecutable, sh:SPARQLSelectExecutable ;
+ex:007 a sh:SPARQLExecutable, sh:SPARQLSelectExecutable ;
     rdfs:comment "Image map annotation keys and usage counts"^^rdf:HTML ;
     sh:prefixes _:sparql_example_prefixes ;
     schema:keywords "image, mapAnnotation, key, unique, count" ;