Deploying to gh-pages from @ c90f404 🚀

Author: Aariq

articles/fluxnet.html

@@ -68,7 +68,7 @@ colnames(list)
 #> [13] "download_link"          "fluxnet_product_name"   "product_citation"      
 #> [16] "product_id"             "oneflux_code_version"   "product_source_network"
 list[,c("site_id", "product_citation")]
-#> # A tibble: 226 × 2
+#> # A tibble: 238 × 2
 #>    site_id product_citation                                                     
 #>    <chr>   <chr>                                                                
 #>  1 AR-CCg  Gabriela Posse (2025), AmeriFlux FLUXNET-1F AR-CCg Carlos Casares gr…
@@ -81,7 +81,7 @@ list[,c("site_id", "product_citation")]
 #>  8 CA-DB2  Sara Knox (2025), AmeriFlux FLUXNET-1F CA-DB2 Delta Burns Bog 2, Ver…
 #>  9 CA-DBB  Andreas Christen, Sara Knox (2025), AmeriFlux FLUXNET-1F CA-DBB Delt…
 #> 10 CA-DSM  Sara Knox (2025), AmeriFlux FLUXNET-1F CA-DSM Delta Salt Marsh, Ver.…
-#> # ℹ 216 more rows
+#> # ℹ 228 more rows
 ```
 
 ## Downloading data

articles/fluxnet.md

@@ -3,7 +3,7 @@ pkgdown: 2.2.0
 pkgdown_sha: ~
 articles:
   fluxnet: fluxnet.html
-last_built: 2026-02-12T18:41Z
+last_built: 2026-02-12T23:01Z
 urls:
   reference: https://ecosystemecologylab.github.io/fluxnet-package/reference
   article: https://ecosystemecologylab.github.io/fluxnet-package/articles

pkgdown.yml

@@ -5,7 +5,7 @@ Create a "manifest" of downloaded and unzipped FLUXNET data files
 ## Usage
 
 ``` r
-flux_discover_files(data_dir = "fluxnet/unzipped")
+flux_discover_files(data_dir = "fluxnet/unzipped", ...)
 ```
 
 ## Arguments
@@ -16,10 +16,17 @@ flux_discover_files(data_dir = "fluxnet/unzipped")
   the `output_dir` used for
   [`flux_extract()`](https://ecosystemecologylab.github.io/fluxnet-package/reference/flux_extract.md).
 
+- ...:
+
+  Arguments passed to
+  [`flux_listall()`](https://ecosystemecologylab.github.io/fluxnet-package/reference/flux_listall.md).
+
 ## Value
 
 Prints a summary of discovered available data and returns (invisibly) a
-dataframe with file paths and metadata extracted from file names.
+dataframe with file paths and metadata extracted from file names and
+merged in from
+[`flux_listall()`](https://ecosystemecologylab.github.io/fluxnet-package/reference/flux_listall.md).
 
 ## Examples
 

reference/flux_discover_files.html

@@ -10,11 +10,7 @@ flux_download(
   site_ids = "all",
   download_dir = "fluxnet",
   overwrite = FALSE,
-  use_cache = TRUE,
-  cache_dir = rappdirs::user_cache_dir("fluxnet"),
-  cache_age = as.difftime(30, units = "days"),
-  log_file = NULL,
-  echo_cmd = FALSE
+  ...
 )
 ```
 
@@ -49,30 +45,10 @@ flux_download(
   skip downloading existing files, unless they are invalid .zip files
   (e.g. due to partial download or corruption).
 
-- use_cache:
+- ...:
 
-  Logical; use cached list of files available to download if it exists
-  and is not older than `cache_age`?
-
-- cache_dir:
-
-  The directory to store the list of available FLUXNET data in.
-
-- cache_age:
-
-  A `difftime` object of length 1. If there are no cached snapshots more
-  recent than `cache_age`, a new one will be downloaded and stored. You
-  can force the cache to be invalidated with `cache_age = -Inf`.
-
-- log_file:
-
-  An optional file path (e.g. `"log.txt"`) to direct the
-  `fluxnet-shuttle` log to. Useful for debugging.
-
-- echo_cmd:
-
-  Set to `TRUE` to print the shell command in the console. Passed to
-  [`processx::run()`](http://processx.r-lib.org/reference/run.md).
+  Arguments passed to
+  [`flux_listall()`](https://ecosystemecologylab.github.io/fluxnet-package/reference/flux_listall.md).
 
 ## Value