update jooq and spring boot (#93)

Author: southeo

.github/workflows/.trivyignore

@@ -1,3 +1 @@
-# June 16
-# Issue with Postgres - Spring boot needs to update its version
-CVE-2025-49146
+Changes

pom.xml

@@ -6,7 +6,7 @@
   <parent>
     <groupId>org.springframework.boot</groupId>
     <artifactId>spring-boot-starter-parent</artifactId>
-    <version>3.4.5</version>
+    <version>3.5.3</version>
     <relativePath/> <!-- lookup parent from repository -->
   </parent>
   <groupId>eu.dissco.core</groupId>

src/main/java/eu/dissco/core/digitalspecimenprocessor/database/jooq/Indexes.java

@@ -34,7 +34,6 @@ create table digital_media_object
             primary key,
     version             integer                  not null,
     type                text,
-    digital_specimen_id text                     ,
     media_url           text                     not null,
     created             timestamp with time zone not null,
     last_checked        timestamp with time zone not null,