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update test example scripts deafult num permutationsn to 200
1 parent 56cbabf commit 03a591a

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Lines changed: 6 additions & 6 deletions

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test/example_malWC_docker.sh

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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study="./data/pvals/exampleOR/"
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study_random="./data/pvals/exampleRR/"
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modules="./data/modules/ker_based/"
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num_permutations=500
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num_permutations=200
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./fishnet_multi.sh \
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--study $study \

test/example_maleWC.sbatch

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@@ -14,12 +14,12 @@ export NXF_CONDA_CACHEDIR=""
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export TMPDIR=""
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export NXF_TEMP=""
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study="./data/pvals/exampleOR/"
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study_random="./data/pvals/exampleRR/"
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modules="./data/modules/ker_based/"
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num_permutations=500
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study="./test/exampleOR/"
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study_random="./test/exampleRR/"
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modules="./test/ker_based/"
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num_permutations=200
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./fishnet_multi.sh \
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./fishnet.sh \
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--study $study \
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--study-random $study_random \
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--modules $modules \

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