ci: show full conda package list to diagnose Python 3.10 failure #8

	name: CI

	on:
	push:
	branches: [master, develop]
	pull_request:
	branches: [master, develop]

	jobs:
	test:
	name: Python ${{ matrix.python-version }} / ${{ matrix.os }}
	runs-on: ${{ matrix.os }}

	strategy:
	fail-fast: false
	matrix:
	os: [ubuntu-latest, macos-latest]
	python-version: ["3.10", "3.11", "3.12"]

	defaults:
	run:
	shell: bash -l {0}

	steps:
	- name: Checkout repository
	uses: actions/checkout@v4

	- name: Set up conda (miniforge)
	uses: conda-incubator/setup-miniconda@v3
	with:
	miniforge-version: latest
	python-version: ${{ matrix.python-version }}
	activate-environment: mastermsm-test
	auto-activate-base: false

	- name: Install dependencies
	run: \|
	conda install -y -c conda-forge \
	numpy scipy matplotlib networkx \
	mdtraj scikit-learn
	pip install pytest
	pip install -e .

	- name: Show package versions
	run: conda list \| grep -E "numpy\|scipy\|mdtraj\|networkx\|scikit"

	- name: Run tests
	run: \|
	pytest mastermsm/test/ -v --tb=long > pytest-output.txt 2>&1
	RESULT=$?
	cat pytest-output.txt
	exit $RESULT

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